Wednesday, 6 March 2013

Cloning and its Impacts on Endangered Species- Draft


Paper

Cloning and its Impacts on Endangered Species[1]
Lee Jia Huan Amanda (amanda.lee.2012@sis.smu.edu.sg), 1st Year student, Bachelor of Science (Information Systems Management), School of information Systems

Executive Summary

This paper serves to provide an introduction to cloning. The possible uses of therapeutic cloning in humans are explored, but the main focus of the paper is on reproductive cloning.  Some of the significant milestones in the history of cloning are shown, as well as some of the different techniques that are presently used to clone certain animals, and the risks that cloning carries. The paper ends off with the possible implications of cloning on endangered and extinct animals in the future.


Introduction to Cloning

Cloning is the process of creating an organism, or a part of an organism, from the genetic material that comes solely from one other organism. The end product of the cloning process would be genetically identical to the donor. This has profound implications on many issues that the world faces today.


Future Opportunities

According to United States National Kidney Foundation, there are 116,680 patients awaiting lifesaving organ transplants, of which 80% are waiting for kidney transplants. 13 people die each day waiting for a transplant, and almost 5000 people died waiting for a kidney (2012). All clearly show that the amount of organ donors is insufficient to meet the needs of the patients. This is especially so for for kidney transplants, as the number of patients waiting for a transplant (94,669) far outweighs the number of transplants that actually took place (16,812). One of the problems attributed to this situation is the fact that finding suitable donors is not an easy task. Tissue rejection is a major concern of organ transplants and cloning, when further developed, might reduce the need for organ donors entirely. This is because organs can be cloned using the patient’s own cell, which will not be rejected by the patient’s body since the cloned organ transplanted will not be seen as a foreign object in the body.

Cloning might also mark the end of the need for prosthetic limbs in humans and animals. If cloning technology is further developed, the handicapped may be able to replace their dysfunctional or missing limbs not with prosthetic limbs, but with limbs that are cloned from their own cells. Should we be able to replicate the nerves and muscles in our limbs as well, the handicapped might be able to use the cloned limb as any other person would.

Another potential application of cloning that is being explored would be to clone endangered animals. This will ensure that the species would continue to survive. If this is successful, researchers may also be able to bring back extinct species, some of whose bodies are preserved in frozen zoos, where their genetic material is still available.


History of Cloning

Timeline of cloning, according to the Harvard Medical School:

1962:
John Gurdon claims to have cloned South African frogs
According to Fatahalian, Schneider and Reavis (1998), Biologist John Gurdon claimed that he has cloned South African frogs from the nucleus of differentiated intestinal cells. However, many scientists remained skeptical of his work, for instance, Dennis Smith found undifferentiated sex cells in the intestinal tissues of the frogs. Hence, some of the frogs cloned could have been cloned from the undifferentiated sex cells rather than from the adult intestinal cell. Although it has never been proven if Gurdon did manage to clone the frogs, he did manage to generate public debate on cloning.

1964:
F.C. Steward grew a complete carrot plant from fully differentiated carrot root cells

1979:
Karl Illmensee claims to have cloned 3 mice
According to Fatahalian, Schneider and Reavis (1998), Illmensee’s claim came as a surprise at the time, because researchers were beginning to doubt that mammals could be cloned after many failures. However, no one has actually seen Illmensee cloning the mice in his lab, hence it cannot be determined if he did clone the mice.


1984:
Occurrence of the first mammalian cloning, when Steen Willadsen cloned a sheep from embryonic cells
According to Wilmut, Willadsen found out that by coating the splitting embryo in a jelly-like casing made from seaweed, the problem of having the mammalian mother’s immune system destroy the embryo could be avoided. The technique that Willadsen used can be applied when trying to save endangered species, since the embryo of the endangered species can be implanted into the uterus other common subspecies, even after the embryo has been split. As a result of this, multiple clones can be created at the same time, limited only by the number of times that the embryo can be split.

1986:
Steen Willadsen and Neal First, Randal Prather and Willard Eyestone cloned cows from embryonic cells in separate events

1995:
Ian Wilmut and Keith Campbell cloned two sheep, Megan and Morag, from cells extracted from differentiated embryos

1996:
Ian Wilmut and Keith Campbell cloned Dolly the sheep from adult cells
The cloning of Dolly was a major development in cloning history because she was the first animal to be cloned from a mammary cell, which is a differentiated cell, via the Roslin technique. All the other animals cloned before her were cloned from totipotent cells.

Ian Wilmut and Keith Campbell cloned Polly, a lamb, skin cells
Polly was cloned after Dolly, and is the first transgenic animal to be cloned. The adult cell that Polly was cloned from was genetically engineered to contain a human gene. The gene will result in human proteins being present in the milk that Polly produces. It is hoped that the human proteins in the milk can be extracted and given to patients who suffer from hemophilia or bone diseases (CNN, 1997).

1997:
Two Rhesus monkeys were cloned at the Oregan Regional Primate Center
President Clinton prohibited the use of federal funds for human cloning

1998:
Ryuzo Yanagimachi cloned fifty mice from adult cells using the Honolulu Technique
The Honolulu technique is more efficient than the Roslin technique used to clone Dolly.

2001:
Noah, the bull gaur, was the first endangered animal to be cloned at the Advanced Cell Technology, Inc.
It was cloned using the nuclear transfer technique. However, it died from an infection not long after its birth.

2003:
Dolly the sheep was put to sleep after she suffered from lung cancer and arthritis


Present Situation

There are many techniques that can be used for cloning. However, the most famous methods are the somatic cell nuclear transfer (SCNT), the Roslin technique and the Honolulu technique.


Somatic Cell Nuclear Transfer

The diagrams below show the process of the SCNT:

Figure 1- Diagram showing the process of embryonic cloning

Source: The Naked Scientists


The genetic material from the haploid egg cell of an organism is first removed. The nucleus from the diploid donor adult cell is then isolated and inserted into the egg cell (which now contains no genetic material) via the process of somatic cell nuclear transfer. An electric shock is then applied to the egg cell to start the process of cell division and growth, producing a blastocyst.


Figure 2- Diagram showing the process of making embryonic stem cells

Source: The Naked Scientists

The cells in the inner cell mass of the blastocyst are undifferentiated stem cells. These stem cells are extracted from the blastocyst and placed in a petri dish where the cells further multiply to form an embryonic stem (ES) cell colony under controlled conditions. As the colony gets larger, the cells can be split into even smaller colonies and be allowed to grow on different petri dishes. The blastocyst can be allowed to develop into an embryo, before it is implanted into the uterus of a female animal.


Roslin Technique

The Roslin technique was developed by the Roslin Institute. It was made famous after it was used to clone Dolly the sheep. The technique is a slight variation of the SCNT (Bailey, date unknown). The diagram below shows the process of the Roslin technique:

Figure 3 – Diagram showing the process of the Roslin technique

Source: BioInformatics, date unknown

The Roslin technique was developed by the Roslin Institute. To clone Dolly the sheep using this technique, mammary cells were first removed from a Finn Dorset and grown in culture. The nucleus of an ovum was removed from a Scottish Blackface before an electric shock was applied to induce the enucleated ovum to fuse with the Finn Dorset mammary cell. The fused cell was then allowed to develop into an embryo in the tied oviduct of a sheep, before it was extracted and implanted into a surrogate mother ewe’s womb. The ewe carried the embryo until it was ready to give birth to Dolly, a Finn Dorset. Dolly shares the exact same DNA that the mammary cell of the adult Finn Dorset contained. Megan and Morag, the sheep cloned by Ian Wilmut, were also cloned using this technique, with the exception that the donor cells used were embryonic cells (Alvarez-Bautista, 2009).



Honolulu Technique

The Honolulu Technique was developed by the University of Hawaii, and was used to clone 50 mice. Like the Roslin technique, it is a variation of the SCNT. The main difference between the Honolulu and the Roslin technique is that in the Honolulu technique, the donor nucleus is injected directly into the enucleated egg using a pipette, while an electric pulse is used to fuse the donor cell and the egg in the Roslin technique. The egg containing the injected nucleus is then cultured in vitro before it is implanted into a surrogate mother mouse. With this method, the team led by Ryuzo Yanagimachi cloned three generations of mice which were all genetically identical (Alvarez-Bautista, 2009).


Efficiency of the Techniques

The efficiency of SCNT is 0.1-3% (Genetic Science Learning Center, 2012), while 1 clone is produced out of 277 (0.3%) attempts for the Roslin technique, and 3 out of 100 (3%) for the Honolulu technique (Fatahalian, Schneider and Reavis, 1998). This makes the Honolulu technique more efficient than the Roslin technique.


Challenges Faced in Cloning


Large Offspring Syndrome

Many clones have the large offspring syndrome (LOS), as they are larger at birth as compared to the animals of natural birth. The clones with the LOS also have larger organs, which may cause breathing and blood flow problems (Genetic Science Learning Center, 2012).


Abnormal Gene Expression

Clones that were cloned from adult cells may not express genes the way that a natural animal would if the cell from which the animal was cloned from might not have been reprogrammed properly by the scientist. Differentiated cells need to be coaxed into its undifferentiated state before the cell can express its genes properly (Genetic Science Learning Center, 2012). Researchers at the Whitehead Institute for Biomedical Research in Cambridge, Massachusetts have found that about 4% of the genes in cloned mice function abnormally, not because of mutations, but because of abnormal activation and expression of the genes (U.S. Department of Energy, 2009).


End-Replication Problem

With every cell division, the chromosomes in the cell become shorter due to the naturally-occurring end-replication problem. The shortening of the telomeres is responsible for the ageing process. Animals with shorter telomeres will age faster than those with longer telomeres. However, the effect of this problem is unclear, since cloned cattle and mice had longer telomeres than their natural counterparts, while Dolly the sheep has shorter telomeres (Genetic Science Learning Center, 2012). However, there is little data about how clones age since many of them do not live long enough (U.S. Department of Energy, 2009).


Health of the Clones

Clones seem to be more susceptible to infections, tumor growths and other diseases. Studies have shown that cloned mice have poor health and die early. Clones have also been known to die with no apparent cause (U.S. Department of Energy, 2009). The DNA of the clone will also deteriorate over time, and an accumulation of the damages may result in the clone having cancer (BioInformatics, date unknown).


Future Considerations

About 100 species becomes extinct each day (Lanza et al., 2000). With cloning, there is a possibility that endangered species can be saved. However, the ability to clone the endangered species does not solve the root cause of the problem, which is the changing environment and human behavior. The reason why the animals are endangered is because the current environment is not suitable for them to live in, either due to the loss of their natural habitat, or because they are constantly being hunted. While cloning can ensure that the species survives, there is no guarantee that the cloned animals will continue to survive well outside of the controlled environment in which they were cloned.

The cloning of endangered animals might potentially marginalize the need and effort put into wildlife conservation. This might happen if people start to think that endangered species can simply be restored by cloning, and hence not feel the need to protect the habitats of the animals. Perhaps it would be wise to put more effort into conserving the natural habitat of animals instead of trying to clone the animals when they are endangered.

According to Darwin’s Theory of Evolution, “It is not the strongest of the species that survives, nor the most intelligent; it is the one that is most adaptable to change.” If the animals are not able to adapt to the changing environment, then they would not survive. Trying to clone the endangered animals might lead to humans disrupting the natural flow of things.

If cloning can save the endangered animals, it might be possible to revive and restore the extinct species. This can be done by taking the genetic material of animals preserved in the frozen zoos. However, there is much that we do not know about the extinct species, such as their behavior, diet and habitat. Hence, bringing these animals back to life may bring about unforeseen circumstances.


Conclusion

There is still a lot more to learn about cloning, and the problems that clones might face throughout their lifespans are still unclear. There may also be other problems that come with cloning endangered species that are still unclear. Cloning these animals may even cause more suffering for the clones.

However, cloning still has limitless potential in terms of solving other problems that we face, such as the need for organs, and the problem of tissue rejection. It may also be helpful in trying to fight diseases in humans and animals. Hence, cloning technology should still be developed, but with prudence, and both the government and the scientists have the responsibility to regulate the use of cloning.



References



CNN, 1997, Report: Cloned sheep has human gene. Retrieved March 5, 2013, from http://edition.cnn.com/TECH/9707/24/polly/index.html

Genetic Science Learning Center August 2012, What are the Risks of Cloning?. Learn.Genetics. Retrieved March 5, 2013, from http://learn.genetics.utah.edu/content/tech/cloning/cloningrisks/

Ian Wilmut, date unknown, Cloning, NewScientist. Retrieved March 5, 2013, from http://www.newscientist.com/data/doc/teaser/mm/201010/instant_expert_2_-_cloning.pdf

Joaquin Alvarez-Bautista, July 2009, Techniques and Procedures for Cloning Mammals. Retrieved March 5, 2013, from http://cosmos.ucdavis.edu/archives/2009/cluster7/ALVARAZ-BAUTISTA_JOAQUIN.pdf

Kayvon Fatahalian, Bennett Schneider, and Brandon Reavis, 1998a, 1962: Did Gurdon clone frogs?, Oracle ThinkQuest, Retrieved March 5, 2013, from http://library.thinkquest.org/24355/data/details/1962.html

Kayvon Fatahalian, Bennett Schneider, and Brandon Reavis, 1998b, The Honolulu Technique, Oracle ThinkQuest, Retrieved March 5, 2013, from http://library.thinkquest.org/24355/data/details/techniques/honolulu.html

National Kidney Foundation, December 2012, Organ Donation and Transplantation Statistics. Retrieved March 5, 2013, from http://www.kidney.org/news/newsroom/factsheets/Organ-Donation-and-Transplantation-Stats.cfm

Regina Bailey, date unknown, Cloning Techniques. About.com Retrieved March 5, 2013, from http://biology.about.com/od/biotechnologycloning/a/aa062306a.htm

Robert P. Lanza, Jose B. Cibelli, Francisca Diaz, Carlos T. Moraes, Peter W. Farin, Charlotte E. Farin, Carolyn J. Hammer, Michael D. West, and Philip Damiani. Cloning. October 2000, 2(2): 79-90. doi:10.1089/152045500436104.

Kat Arney, August 2005, Human Cloning, Part 2 - The Process of Animal Cloning, The Naked Scientists. Retrieved March 5, 2013, from http://www.thenakedscientists.com/HTML/features/article/katarneycolumn11.htm/

U.S. Department of Energy, 2009, Human Genome Project Information.  Retrieved March 5, 2013, from http://www.ornl.gov/sci/techresources/Human_Genome/elsi/cloning.shtml#whatis

Wageningen Bioinformatics Webportal, May 2012, The cloning technique used to clone Dolly. Retrieved March 5, 2013, from: http://www.bioinformatics.nl/webportal/background/dollyinfo.html




[1] This paper was reviewed by Ho Jin Wei Benedict and Lee Heng Sin

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